Package: LEEF.measurement.flowcam 0.8.31
LEEF.measurement.flowcam: Pre-Process and Extract Flowcam Data
More about what it does (maybe more than one line) Use four spaces when indenting paragraphs within the Description.
Authors:
LEEF.measurement.flowcam_0.8.31.tar.gz
LEEF.measurement.flowcam_0.8.31.zip(r-4.5)LEEF.measurement.flowcam_0.8.31.zip(r-4.4)LEEF.measurement.flowcam_0.8.31.zip(r-4.3)
LEEF.measurement.flowcam_0.8.31.tgz(r-4.4-any)LEEF.measurement.flowcam_0.8.31.tgz(r-4.3-any)
LEEF.measurement.flowcam_0.8.31.tar.gz(r-4.5-noble)LEEF.measurement.flowcam_0.8.31.tar.gz(r-4.4-noble)
LEEF.measurement.flowcam_0.8.31.tgz(r-4.4-emscripten)LEEF.measurement.flowcam_0.8.31.tgz(r-4.3-emscripten)
LEEF.measurement.flowcam.pdf |LEEF.measurement.flowcam.html✨
LEEF.measurement.flowcam/json (API)
# Install 'LEEF.measurement.flowcam' in R: |
install.packages('LEEF.measurement.flowcam', repos = c('https://leef-uzh.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/leef-uzh/leef.measurement.flowcam/issues
Last updated 3 years agofrom:0885ed5439 (on master). Checks:OK: 1 WARNING: 6. Indexed: yes.
Target | Result | Date |
---|---|---|
Doc / Vignettes | OK | Nov 11 2024 |
R-4.5-win | WARNING | Nov 11 2024 |
R-4.5-linux | WARNING | Nov 11 2024 |
R-4.4-win | WARNING | Nov 11 2024 |
R-4.4-mac | WARNING | Nov 11 2024 |
R-4.3-win | WARNING | Nov 11 2024 |
R-4.3-mac | WARNING | Nov 11 2024 |
Exports:add_new_dataclassifyextractor_flowcamextractor_flowcam_classifyextractor_flowcam_filterextractor_flowcam_prepareload_parameterpar_classifier_constantpar_classifier_increasingpar_species_trackedpar_templatepre_processor_flowcamprint_parameterraw_data_okregistersave_parameter
Dependencies:classclidata.tabledplyre1071fansigenericsgluelifecycleloggitmagrittrMASSpillarpkgconfigplyrproxypurrrR6randomForestRcpprlangtibbletidyselectutf8vctrswithryaml
Readme and manuals
Help Manual
Help page | Topics |
---|---|
Check if data in input folder is OK and move to raw data folder | add_new_data |
Classify 'algae_traits' nad calculates densities | classify |
Preprocessor flowcam data | extractor_flowcam |
Preprocessor flowcam data | extractor_flowcam_classify |
Preprocessor flowcam data | extractor_flowcam_filter |
Preprocessor flowcam data | extractor_flowcam_prepare |
Load parameter from 'file' | load_parameter |
Name of classifier file for constant temperature treatment | par_classifier_constant |
Name of classifier file for increasing temperature treatment | par_classifier_increasing |
Species tracked | par_species_tracked |
Template function to assign value to parameter in the package wide cache | par_template |
Preprocessor flowcam data | pre_processor_flowcam |
Print the flowcam parameter | print_parameter |
Check if data in raw data folder is OK | raw_data_ok |
Register the processing of flowcam data in the LEEF package | register |
Save parameter into '.yaml' file | save_parameter |